PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85939.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

E2F/DP

Protein Properties

Length: 440aa MW: 48903.6 Da PI: 5.035

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85939.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.3	9.3e-27	147	212	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+ +++ln++a+ L +v ++RRiYDi+NVLe+++liek+ kn+irwkg RWR85939.1 147 RYDSSLGLLTKKFISLIQQAEDATLDLNKAADIL---EV--QKRRIYDITNVLEGIGLIEKTLKNRIRWKG 212 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MSGGVEGSSA ACPQRPPQPP HILRPLKRHF PFSFLAKPLH PHLPAIDPKM GFQTNENPIV 60 DQKPAIPSFS KLTNKTESCN AESGAPTNER YREATTSTTP TSVSGAGGKR PGRAKVSKNK 120 RTRSVPNIPG SDSGLPDNAL NTPGSCRYDS SLGLLTKKFI SLIQQAEDAT LDLNKAADIL 180 EVQKRRIYDI TNVLEGIGLI EKTLKNRIRW KGFDTSTPRE LEEQVSRLKA EVETLYVQDW 240 RLDDKIREVQ ENLTALSEEK NSQKWLYVTR EDIKNLPCFQ NQTVFVIKAP HATTLEVPDP 300 DEDFDYPQQR YQMLLRSAVG PIDCYLVSEH GERLDVNNDP PSTTDMSIEN PENTSNKNAN 360 TLVPTVQDSG TQSEAGQGQD RQKLCSDSTN SQDIPGILKI VPSNEDNGTD YWLLSDLGFS 420 ISDMWKSDQN DPNLVCTPDN

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MSGGVEGSSA ACPQRPPQPP HILRPLKRHF PFSFLAKPLH PHLPAIDPKM GFQTNENPIV  60
DQKPAIPSFS KLTNKTESCN AESGAPTNER YREATTSTTP TSVSGAGGKR PGRAKVSKNK  120
RTRSVPNIPG SDSGLPDNAL NTPGSCRYDS SLGLLTKKFI SLIQQAEDAT LDLNKAADIL  180
EVQKRRIYDI TNVLEGIGLI EKTLKNRIRW KGFDTSTPRE LEEQVSRLKA EVETLYVQDW  240
RLDDKIREVQ ENLTALSEEK NSQKWLYVTR EDIKNLPCFQ NQTVFVIKAP HATTLEVPDP  300
DEDFDYPQQR YQMLLRSAVG PIDCYLVSEH GERLDVNNDP PSTTDMSIEN PENTSNKNAN  360
TLVPTVQDSG TQSEAGQGQD RQKLCSDSTN SQDIPGILKI VPSNEDNGTD YWLLSDLGFS  420
ISDMWKSDQN DPNLVCTPDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-108	E2F/DP family protein