PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR85923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 343aa MW: 38338.7 Da PI: 10.0828 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 365.7 | 9e-112 | 1 | 343 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye.............paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnklla 83 mdd+g+re r+++ +y+ + + +++ +++lm++iaerda+ +ernlal+ekkaa+aer+ma lqrd+a++ern+a+verd++++a RWR85923.1 1 MDDSGQREngRHRPdQYKgihaqwtplahhqMKDHHNHHNTMKLMAIIAERDAAYQERNLALAEKKAALAEREMAILQRDAAIHERNNAIVERDSAIAA 99 99***99999****9**********99654311344556789********************************************************* PP GAGA_bind 84 lllvensla..salpvgvqvlsgtksidslqqlse.pqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkek.kakkkkkksekskkk 177 l++ +++++ s +p +v gtk+ ++ q + + p++ d a +re ++++a+pi++ ++ a + ++ k+++++++ ++ ka+k+++k +k ++ RWR85923.1 100 LEYSREKSMngSRTPYLPGVPCGTKHGHHPQLVPNpPHIVDAAPRhTREVHISDAFPISSIPDAAAKPRQAKRKETKAQLSSPmKASKPRRKDKKGAED 198 *997766555778888889999*********976668888888777**************999999988888655554433321333555555555555 PP GAGA_bind 178 vkkesad.er....................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRi 255 +k+ ++ +k+ +k +dl+ln+vs+Dest+PvPvCsCtG++rqCYkWGnGGWqSaCCttt+S yPLPv++++r+aRi RWR85923.1 199 LNKQVLGvKQlewkgqeltggedldkqlsvMKHGWKGQDLGLNQVSFDESTMPVPVCSCTGITRQCYKWGNGGWQSACCTTTLSLYPLPVMPDKRHARI 297 555554423367999************************************************************************************ PP GAGA_bind 256 agrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +grKmS++af+klL++LaaeG+dls pvDLkd WAkHGtn+++ti+ RWR85923.1 298 GGRKMSGSAFTKLLSRLAAEGHDLSLPVDLKDRWAKHGTNRYITIK 343 *********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MDDSGQRENG RHRPDQYKGI HAQWTPLAHH QMKDHHNHHN TMKLMAIIAE RDAAYQERNL 60 ALAEKKAALA EREMAILQRD AAIHERNNAI VERDSAIAAL EYSREKSMNG SRTPYLPGVP 120 CGTKHGHHPQ LVPNPPHIVD AAPRHTREVH ISDAFPISSI PDAAAKPRQA KRKETKAQLS 180 SPMKASKPRR KDKKGAEDLN KQVLGVKQLE WKGQELTGGE DLDKQLSVMK HGWKGQDLGL 240 NQVSFDESTM PVPVCSCTGI TRQCYKWGNG GWQSACCTTT LSLYPLPVMP DKRHARIGGR 300 KMSGSAFTKL LSRLAAEGHD LSLPVDLKDR WAKHGTNRYI TIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.1 | 1e-101 | BBR-BPC family protein |