PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85890.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

DBB

Protein Properties

Length: 274aa MW: 30852.4 Da PI: 5.3741

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.3	5.6e-07	4	45	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ ++++e++ fC ++ lC C + H+ H++ RWR85890.1 4 QCDVCHREEASVFCSADEAALCYGCDSRVHRAnklsskhHRF 45 7*****************************778888886766 PP
2	zf-B_box	27.1	8.8e-09	54	91	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg.Ht 38 e ++C+ ++e ++ lfC++++ lC++C l +H H RWR85890.1 54 ESPRCDICQERRAFLFCQEDRAILCRECDLPIHTAnHL 91 6799****************************954664 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MKIQCDVCHR EEASVFCSAD EAALCYGCDS RVHRANKLSS KHHRFSLLHP SLRESPRCDI 60 CQERRAFLFC QEDRAILCRE CDLPIHTANH LTQKHNRFLL TGIKLSSPFS PISSHSDEST 120 HQTIQDDHNS NKEEDNKKEE ASTEMGSSLP VEKMANAFTD SSQGSKTEDL CTSSISEYLM 180 ETLPGWHVED LLASSAPVEG LCETDGFSDL GLASNDFSIW VPQVPPISGL IYPSGALDTR 240 NEVGSKDFKE RRWNEDGLSV PEMRPTYKRA RPFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-65	DBB family protein