PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR85752.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 415aa MW: 47301.8 Da PI: 5.3539 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3.2e-08 | 16 | 45 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 +g+WT+ Ed +lv ++ ++G g+W++ ++ RWR85752.1 16 KGPWTPAEDTRLVTYISKYGHGNWRALPKQ 45 79***********************98876 PP | |||||||
2 | Myb_DNA-binding | 56.9 | 4.9e-18 | 98 | 143 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e ++++++qlG++ W++Ia++++ gRt++++k+ w+++l RWR85752.1 98 RGNFSQEEEETIIKLHRQLGNK-WSKIASCLP-GRTDNEIKNVWNTHL 143 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 415 aa Download sequence |
MGRGRAPCCD KVGLKKGPWT PAEDTRLVTY ISKYGHGNWR ALPKQAVLMN NSVFKLLNLN 60 YLQFKEAKMR LMNVTGLLRC GKSCRLRWIN YLRPDIKRGN FSQEEEETII KLHRQLGNKW 120 SKIASCLPGR TDNEIKNVWN THLKKRSVSK GSNPSNPCIA ESKGLPNSSS SDSISSLSHS 180 NQGIGGTGDE EQEHPTFKSE IPPAESNKEQ LENMHSTLED IFQLPLDEQS MEIWDMLDES 240 KKASSPSTSA CSSYITCSNQ VDAKEAEDKM HSLFKSKSPN DDEHDHDMIH IETKEEPPKE 300 ILEIPYEPDR DFWDMLDDDF CSSSCSGGVF DGLESHINAA INEDRIGEVD YRRLRHFENE 360 LELWMMGNDH HKSLMKTEIE PLNPSSTDDE NENKVPHDSI KYFQTWPQSP FTFSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 1e-64 | MYB family protein |