PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85532.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 712aa MW: 78110.4 Da PI: 6.0579

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.1e-09	488	525	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + RWR85532.1 488 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 525 664559******************************88 PP
2	BELL	120.3	8.8e-39	351	422	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq k +kL +l+eVd rY+qy++q+q v+ssF+++ag+g+akpYt+lAl++iSrhFrcL+dai++qi RWR85532.1 351 ERQDLQTKMTKLTAMLDEVDIRYRQYHHQMQSVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAISNQI 422 799********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
MATYYNTSNQ RDAIPTLYLG DPGHASYHES SLTGSMMYLN YSSAGSYSDH LAGNSQPQQN 60 CVQLPVPTTM LSQDSSVGPS ESTASHQVIP SNLVSPGLGE HSFGVWHDGR NETFFQAINQ 120 QINNNTDDHV SHSVTEEPQM DIQSQLGVLQ REQSLQSQRP NVSAIQGQGL SLSLSTQIPS 180 TIQAASFQYH QHTNAEISFM GSHQSILGAG GSCREDGSLN KESRNAELPP YSGGDHAITG 240 GMLGSNLQYS AALKQMHRDC SPYGFSALSS TIPNSKYLKA VQQLLDEVVN VKKALKQDSD 300 KHQSIHTSAG MPGSRKNDVG SISGALPPSE GMPANHLDST SSSTNDLSPA ERQDLQTKMT 360 KLTAMLDEVD IRYRQYHHQM QSVVSSFDVI AGCGAAKPYT ALALQTISRH FRCLRDAISN 420 QIKVARKSLG EEDNASGKGG GISRLRFVDQ QLRQQRALQQ FGVIQQHAWR PQRGLPENSV 480 SILRAWLFEH FLHPYPKDSD KIMLARQTGL TRSQVSNWFI NARVRLWKPM VEEMYKEEIG 540 DAEMDSNSSS DNATKVREEM KSSDNREEIQ SMKSADEKCP ISQYSDSKKS DNVSDVEMAV 600 TTPGFQNGVN NEDHCSLLQD ALIQPDGNGR FMAYQMAELG RFGNGGVSLT LGLQHCDGDL 660 PVSGGQQNFV SVRGGDDDMY GATPDRVDAA EYDCMNLGNQ RHRFSSSQLL NV

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

MATYYNTSNQ RDAIPTLYLG DPGHASYHES SLTGSMMYLN YSSAGSYSDH LAGNSQPQQN  60
CVQLPVPTTM LSQDSSVGPS ESTASHQVIP SNLVSPGLGE HSFGVWHDGR NETFFQAINQ  120
QINNNTDDHV SHSVTEEPQM DIQSQLGVLQ REQSLQSQRP NVSAIQGQGL SLSLSTQIPS  180
TIQAASFQYH QHTNAEISFM GSHQSILGAG GSCREDGSLN KESRNAELPP YSGGDHAITG  240
GMLGSNLQYS AALKQMHRDC SPYGFSALSS TIPNSKYLKA VQQLLDEVVN VKKALKQDSD  300
KHQSIHTSAG MPGSRKNDVG SISGALPPSE GMPANHLDST SSSTNDLSPA ERQDLQTKMT  360
KLTAMLDEVD IRYRQYHHQM QSVVSSFDVI AGCGAAKPYT ALALQTISRH FRCLRDAISN  420
QIKVARKSLG EEDNASGKGG GISRLRFVDQ QLRQQRALQQ FGVIQQHAWR PQRGLPENSV  480
SILRAWLFEH FLHPYPKDSD KIMLARQTGL TRSQVSNWFI NARVRLWKPM VEEMYKEEIG  540
DAEMDSNSSS DNATKVREEM KSSDNREEIQ SMKSADEKCP ISQYSDSKKS DNVSDVEMAV  600
TTPGFQNGVN NEDHCSLLQD ALIQPDGNGR FMAYQMAELG RFGNGGVSLT LGLQHCDGDL  660
PVSGGQQNFV SVRGGDDDMY GATPDRVDAA EYDCMNLGNQ RHRFSSSQLL NV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-127	TALE family protein