PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85387.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 296aa    MW: 32468.6 Da    PI: 9.1264
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.6e-20171221255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  RWR85387.1 171 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAAIAYDQAAYRMRG 221
                 7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MHLPPYKILV NSPKFTFDSF NPAEIVRTKT LLSLPIFQAK MSGQSTESDF HAVLESVRCH  60
LLEDSELPAR SSQASYCRTS SSLFPCLTES WGDLPLKVDD SDDMVVYGFL NDAISAGWIP  120
SLAATENTSF PPFQPVTVKS EPIDITPAPP RATAAPRQEK QAQAASERGR HYRGVRRRPW  180
GKFAAEIRDP AKNGARVWLG TFETAEDAAI AYDQAAYRMR GSRALLNFPL RLATSGFTPA  240
PSSKRSSPEP TSSSESSSLK RRRRGGQAAA AQAELDFSRS VQHSVNVLLG EQLLVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-38ERF family protein