PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR85238.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

E2F/DP

Protein Properties

Length: 523aa MW: 58361.6 Da PI: 4.6485

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR85238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	83	2.4e-26	147	211	2	71
E2F_TDP 2 keksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 ++sL+ lt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg RWR85238.1 147 CDSSLGFLTKKFIHLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKIKNRIRWKG 211 579****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MSGGSRMRDP AAHPSPPGPM MQTIRRHLPF SSSKPPFMLP GDYHRFPSGG EARRFADDEH 60 GAIVVKPTLK RKCKTENYEL ESSEWMTSPA YTEVLNSPLR TPISGKGCGT CSRSKGSKYT 120 KSGPQSPMSN AGSPSCNSLT PIGTCRCDSS LGFLTKKFIH LIKHAEDGIL DLNKAADTLE 180 VQKRRIYDIT NVLEGIGLIE KKIKNRIRWK GLDVSRPGEV DTDAITLQAE VENLSLEEHI 240 LDDRIREMRE RLRDLSEDES NQKWLYVTGE DIKSLPCFQN DTLMAIKAPD GTTLEVPDPD 300 EFFLSLQVQA VEYPQRRYRI ILRSTMGPID VFLVSQFEEK FEEMNVEETT PSLQLASSSG 360 SAVTMITDNS DGKEMGLEVQ DPQRICSDLN ASQDFVGGIM KIVPSDNDAD YWLLSDADVS 420 ITDMWGTESG VEWDGADRLT TENFAEGDVS TLQSQTPPSG VIEVPSYDIK YAEHLKGFEN 480 GKVEIPNESD TKFEEYDSEA GKLELFAISK HLAKFKLLSV ERY

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MSGGSRMRDP AAHPSPPGPM MQTIRRHLPF SSSKPPFMLP GDYHRFPSGG EARRFADDEH  60
GAIVVKPTLK RKCKTENYEL ESSEWMTSPA YTEVLNSPLR TPISGKGCGT CSRSKGSKYT  120
KSGPQSPMSN AGSPSCNSLT PIGTCRCDSS LGFLTKKFIH LIKHAEDGIL DLNKAADTLE  180
VQKRRIYDIT NVLEGIGLIE KKIKNRIRWK GLDVSRPGEV DTDAITLQAE VENLSLEEHI  240
LDDRIREMRE RLRDLSEDES NQKWLYVTGE DIKSLPCFQN DTLMAIKAPD GTTLEVPDPD  300
EFFLSLQVQA VEYPQRRYRI ILRSTMGPID VFLVSQFEEK FEEMNVEETT PSLQLASSSG  360
SAVTMITDNS DGKEMGLEVQ DPQRICSDLN ASQDFVGGIM KIVPSDNDAD YWLLSDADVS  420
ITDMWGTESG VEWDGADRLT TENFAEGDVS TLQSQTPPSG VIEVPSYDIK YAEHLKGFEN  480
GKVEIPNESD TKFEEYDSEA GKLELFAISK HLAKFKLLSV ERY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-144	E2F/DP family protein