PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR84889.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 28319 Da PI: 9.3388 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.1 | 3.7e-09 | 116 | 186 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC.....................TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkas..................kapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + + + +Ka++L A++Y+k+Lq RWR84889.1 116 QDHIIAERKRREKLSQRFIALSAIVPGLKkviflfflptinliffssRFYEYVWDKASVLGDAIKYVKQLQ 186 5699***********************877***************97666666*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MEASQQGADR PMKQHRTNSW NSCTTEHVST PDASPPNLLS FGNQNSPTNQ QQFYSNLIAG 60 AAAKPKDESL SPRTSNIPTD ILISQSSFFK PRLRVQGWSG AKRVNMGTAR PPSHTQDHII 120 AERKRREKLS QRFIALSAIV PGLKKVIFLF FLPTINLIFF SSRFYEYVWD KASVLGDAIK 180 YVKQLQDKVK TMEEQTLKKT VESVVFIKKS QLCGDDDLSS SDENFDGHSD EPLPEIEARV 240 SEKEHSYKSP L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 127 | ERKRRE |
2 | 123 | 128 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 8e-34 | bHLH family protein |