PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84714.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 101aa    MW: 11969.6 Da    PI: 4.8383
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.45.1e-113573646
                     HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +eE++l+ +++++lG + W++I+ +++ +Rt++++  +w++
       RWR84714.1 35 PEEEDLICRLHRLLGDR-WELISGRLP-NRTAEEVERYWRM 73
                     8**************99.*********.***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MEPVHDFDRN SIQDGVGSEM VENQCEKEKW DDMLPEEEDL ICRLHRLLGD RWELISGRLP  60
NRTAEEVERY WRMKDSKNLE NKVLRPVCVR AKPSLKLAEM S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.12e-18MYB_related family protein