PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84668.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 295aa MW: 31376.9 Da PI: 8.0616

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.5	1e-10	12	55	4	45
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W+ e ++l+ +a + + + +W++Ia+ ++ g+t ++k+++ RWR84668.1 12 WSREQEKLFENALATHTEDsddRWEKIAADVP-GKTIAEIKHHYE 55 ******************************.********96 PP
2	Myb_DNA-binding	40.4	6.7e-13	122	166	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky RWR84668.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKY 166 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MTTDESGNSS LWSREQEKLF ENALATHTED SDDRWEKIAA DVPGKTIAEI KHHYELLVED 60 INGIESGRVP LPAYVSSSEG SGDHGSEGGA GKKGSHFGQY QGDSNHGGKA SRSDQERRKG 120 IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVSRTPTQVA SHAQKYFIRL NSMNKDRRRS 180 SIHDITSVGN GDISTPQGPI TGQTNGPAGA AVKSVKQSSQ PPPVAPGAGV YGGTTIGQPI 240 GGPLVSAVGT PVNLPAPPHM AYGVRAPVTG TIVPGAPMSM PPPMTYPMPH ASAHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-111	MYB family protein