PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR84650.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 210aa MW: 23500.6 Da PI: 5.7391 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.2 | 8e-10 | 48 | 92 | 4 | 51 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 ++ rE+ RRdr+N++f eL ++l + + +K +Ka+iL A + + RWR84650.1 48 SKACREKMRRDRLNDRFVELGSVLHPG---RPPKSDKAMILSDAARML 92 6789**********************8...89***********98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
METNLNPDFD WIDQVGGGSD SGFRWSLDDL GDLPNAWARD ESVLAPKSKA CREKMRRDRL 60 NDRFVELGSV LHPGRPPKSD KAMILSDAAR MLVELRSEAQ QLKEENENLQ QTIKELKAEK 120 NELREEKTKL KADKERLEQQ LKAITMPPPA YMPHLAPFHA SAVASFASPG QAAANKTTLF 180 PVYPGVAMWQ WVPPADVDTS QDHKLQSPAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 7e-59 | bHLH family protein |