PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84231.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 1042aa MW: 118499 Da PI: 7.804

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	128	222	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk...........kek.dgkwevtkleleHnH 87 +fY +YA+++GF+vr+ ++s ++ +++ +fvCs+eg+r++ +++ +r + r gC a+l++k k+k + kw+v k+ +eHnH RWR84231.1 128 RFYFDYAENMGFRVRICGRRRSPHTWKTVGVDFVCSREGFRRDGSTS------KRRNYRSGCLAMLRIKrtefrrnmprkKRKdSRKWVVVKFIKEHNH 220 59**************************************99888......5556677777777776222111111114446889********** PP FAR1 88 el 89 el RWR84231.1 221 EL 222 *9 PP
2	FAR1	68.5	1.7e-21	314	397	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YA++vGF++r+++ ++s r+g ++ +fvC+keg+r++e k+ +r++tr gC ak+ + k +gkw + k++++H Hel+p RWR84231.1 314 FYFAYATRVGFDIRINSRRRSVRDGATIAVQFVCTKEGFRRKECKN------KRQQTREGCLAKFLIIKGASGKWTLRKFVKDHCHELFP 397 9**************************************99888......8999******************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1042 aa Download sequence
MTTWDRDPSK TLSCHELNLH MQRALEQLYI VLRELQQRTI LKGMCGKRFS QTVMEVTTNE 60 SNASKESDVC TKHNTTELCM AEDPDSRMGE NEVVAGTSAE KPSTESDECE DLDPCVGMEF 120 NSEWDAQRFY FDYAENMGFR VRICGRRRSP HTWKTVGVDF VCSREGFRRD GSTSKRRNYR 180 SGCLAMLRIK RTEFRRNMPR KKRKDSRKWV VVKFIKEHNH ELGDPPEAPF LHSHGHLVDE 240 SGGSDNVFPL QGCRTFIQGL RKGIVIKKVD DHAAEIDESI ENPVERVIAD SNEPANLEPC 300 VGMEFDSEEA ATVFYFAYAT RVGFDIRINS RRRSVRDGAT IAVQFVCTKE GFRRKECKNK 360 RQQTREGCLA KFLIIKGASG KWTLRKFVKD HCHELFPGEV PVLRSYKLVS TQSDGCGDGC 420 GDSVFTLQGR SRKSIQDHSN CIQNLRERNF GKDAQNVLEY FKHMQTKNAS FFYAIQVDKE 480 FRMTNLFWAD ARSRMAYKYF GDVVTIDITY NQHGIPLVLF LGSNHHKKPM LFGSAQLLDE 540 SEISFVWLFN TWLEAMSGCH PISVISNLDR TVEAAVKKVF PSTRHHYCKR DVLKKLSEKL 600 GHVQCKHEDF LRDFSKCISL VELNDEFESC WKIFIDKYEL AENEWLQLLY SKREQWVQVF 660 SQDTSSTKMF SRNDITNSFS GVNINAEISL GAFVDQCEKA IDSQYEKEFE EDFKTCYMKP 720 IMKTGLPMEV QAAEAYTRTV FLDFQEQLFQ SLHHTSEITN EDGPICTARV VEFGAGKSGY 780 TVAFNSSEVK ASCSCQMFEY AGILCRHVLR VFSMKNITML PSHYILKRWT RNSTSVEIVE 840 QNIAVLDNAQ DSWASRFNYL YCQAAKYAGE ASSTFNIYHV AMRALRKALQ EVDEAKKDGG 900 TVSQISAPVN RNSSGGNNQE RCPPDNAVSD VNICDSQQGN TEGSPTTTTN TGNRPAPEEQ 960 LKKKRKCQVC KDTNHDKRKC PLLRGARDSS TSNVTSGMPG THHLRGGTVE QFSLTHIIPF 1020 IPRVHGASSL AILPPVSCNL GC

Sequence ? help Back to Top

Protein Sequence Length: 1042 aa Download sequence

MTTWDRDPSK TLSCHELNLH MQRALEQLYI VLRELQQRTI LKGMCGKRFS QTVMEVTTNE  60
SNASKESDVC TKHNTTELCM AEDPDSRMGE NEVVAGTSAE KPSTESDECE DLDPCVGMEF  120
NSEWDAQRFY FDYAENMGFR VRICGRRRSP HTWKTVGVDF VCSREGFRRD GSTSKRRNYR  180
SGCLAMLRIK RTEFRRNMPR KKRKDSRKWV VVKFIKEHNH ELGDPPEAPF LHSHGHLVDE  240
SGGSDNVFPL QGCRTFIQGL RKGIVIKKVD DHAAEIDESI ENPVERVIAD SNEPANLEPC  300
VGMEFDSEEA ATVFYFAYAT RVGFDIRINS RRRSVRDGAT IAVQFVCTKE GFRRKECKNK  360
RQQTREGCLA KFLIIKGASG KWTLRKFVKD HCHELFPGEV PVLRSYKLVS TQSDGCGDGC  420
GDSVFTLQGR SRKSIQDHSN CIQNLRERNF GKDAQNVLEY FKHMQTKNAS FFYAIQVDKE  480
FRMTNLFWAD ARSRMAYKYF GDVVTIDITY NQHGIPLVLF LGSNHHKKPM LFGSAQLLDE  540
SEISFVWLFN TWLEAMSGCH PISVISNLDR TVEAAVKKVF PSTRHHYCKR DVLKKLSEKL  600
GHVQCKHEDF LRDFSKCISL VELNDEFESC WKIFIDKYEL AENEWLQLLY SKREQWVQVF  660
SQDTSSTKMF SRNDITNSFS GVNINAEISL GAFVDQCEKA IDSQYEKEFE EDFKTCYMKP  720
IMKTGLPMEV QAAEAYTRTV FLDFQEQLFQ SLHHTSEITN EDGPICTARV VEFGAGKSGY  780
TVAFNSSEVK ASCSCQMFEY AGILCRHVLR VFSMKNITML PSHYILKRWT RNSTSVEIVE  840
QNIAVLDNAQ DSWASRFNYL YCQAAKYAGE ASSTFNIYHV AMRALRKALQ EVDEAKKDGG  900
TVSQISAPVN RNSSGGNNQE RCPPDNAVSD VNICDSQQGN TEGSPTTTTN TGNRPAPEEQ  960
LKKKRKCQVC KDTNHDKRKC PLLRGARDSS TSNVTSGMPG THHLRGGTVE QFSLTHIIPF  1020
IPRVHGASSL AILPPVSCNL GC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	205	RKKRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-156	FAR1 family protein