PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR84189.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 225aa MW: 25526.8 Da PI: 6.347 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.7 | 1.2e-09 | 131 | 172 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rrRR+ri +++ L++l+P +K++ a++L +A++Y+k L RWR84189.1 131 AARRRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYMKFL 172 569******************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MDISNHTSTT STWVMTIENQ HLLDHLPSEL VYSMEENPFQ IHHTPSSYTG QVSNPLIQTQ 60 KIPPSGHVPN TSCLLEQRRN KEVEEEEDGL GDIKEMIYKI AAMQPVDIDP ATIQKPKRRN 120 VRISDDPQSV AARRRRERIS ERIRILQRLV PGGTKMDTAS MLDEAIRYMK FLKRQVHELQ 180 THQHSPPIDV VSQLEAVDLG SSSSMAPPQG ASFNFARDEC HEGLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 136 | KRRNVRISDDPQSVAARRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09750.1 | 4e-41 | bHLH family protein |