PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84149.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family B3
Protein Properties Length: 230aa    MW: 25881.6 Da    PI: 10.3654
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84149.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.61.7e-16135225199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+k +++s+v+   +l lpk+f++ + ++k  + t+tl desg + + ++    ++ +  l++GWk+F  a++L +gD +vF+l++ +ef  +v ++r+
  RWR84149.1 135 FVKPMLQSHVTGGFWLGLPKQFCDLN-LPK-FDATMTLIDESGGEHQTRY--LAHKAG--LSAGWKGFSIAHELVDGDALVFQLINATEF--KVYIIRA 225
                 89*********************666.554.778****************..666655..9***********************997888..9999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVKGQLQYEE IRKQRLEENK KKLEDLNLTH LLNNLRNASP KSSPVKQGKP RAIRGSKTNV  60
GVRRSSRVAN LPAPDYKGSN VEYGERTWTR GRLAVRCYKR RSLLHRVYAS DEARADAVKK  120
ATKVQSDLDP EFPSFVKPML QSHVTGGFWL GLPKQFCDLN LPKFDATMTL IDESGGEHQT  180
RYLAHKAGLS AGWKGFSIAH ELVDGDALVF QLINATEFKV YIIRASGSLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-63B3 family protein