PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR84020.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 308aa    MW: 33958 Da    PI: 7.8619
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR84020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.61.2e-324399358
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58
                 + +Y+eCl+NhAa+lGghavDGCgEfmps+ ++ +++++lkCaACgCHRnFHRr+ +
   RWR84020.1 43 QPHYRECLRNHAATLGGHAVDGCGEFMPSPLSTlSDPSSLKCAACGCHRNFHRRDDD 99
                 678***************************9999********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MTMELTPIQT TPAPPSSSSA AAAAKPRAPA TLYFTNGGLK RHQPHYRECL RNHAATLGGH  60
AVDGCGEFMP SPLSTLSDPS SLKCAACGCH RNFHRRDDDF DNVVDDDEDE DDAAEFTPPA  120
TKRRSSSSHS PPHFPSAPQM LMALSAGLSG ADADNIPSTP NASLSAGRKR FRTKFSTEQK  180
ERMHAFSEKL GWKMQKKDDK DVEEFCNEIG VGKGVLKVWM HNNKHNFVKR DGLIMPLNTT  240
TTTTSTNGDN NINANNNNNN NGSNAHLING DSLRLSKVPM IFLCEDRRGE IFISKWIYID  300
KTMRKVPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.12e-42ZF-HD family protein