PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84008.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Dof

Protein Properties

Length: 515aa MW: 56181 Da PI: 5.3601

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6.2e-39	143	203	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s +tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ss RWR84008.1 143 PDKILPCPRCNSLDTKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKNSS 203 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MSETTMDSAI KLFGKKISLP ANDEIPSVYS RPEDDPQISS SPQEKKLKQD NEAQEEEEAA 60 AAQEEEEEQG QKDTLSATAT EVEGKDQAAQ NIEESPELAA SSMIVDDPKS GPVDTENASA 120 DAQKTEEERS ETNASKEKTV KKPDKILPCP RCNSLDTKFC YYNNYNVNQP RHFCKKCQRY 180 WTAGGTMRNV PVGAGRRKNK NSSSHYRHIT VSEALQTART DMPEALHHTP LKPNGTVLSF 240 GSDAPFCESM ASVLSIGEKT MRNCHGNGFH HRTEEQTIPV SCGGCCDNGE EHSSGSSITA 300 SNSAEEGNRA NLQEQAPHNC QPLPPHIPCF IGSPWNYPWN AAQWGSPVVP PPPPPAFCTS 360 SFPISFYTAP AYWGCAVPGT WSIPWLSPPS SSPNNAGCSG SVPHSPTLGK HSRDGNMLKQ 420 SDAEKDETLK QSNPERCLWI PKTLRIDDPG EAAKSSIWAT LGIKNDGKAD TMSSRGFFED 480 FHSKGDVRNQ MAETSPMLHA NPAALSRSLT FHESS

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MSETTMDSAI KLFGKKISLP ANDEIPSVYS RPEDDPQISS SPQEKKLKQD NEAQEEEEAA  60
AAQEEEEEQG QKDTLSATAT EVEGKDQAAQ NIEESPELAA SSMIVDDPKS GPVDTENASA  120
DAQKTEEERS ETNASKEKTV KKPDKILPCP RCNSLDTKFC YYNNYNVNQP RHFCKKCQRY  180
WTAGGTMRNV PVGAGRRKNK NSSSHYRHIT VSEALQTART DMPEALHHTP LKPNGTVLSF  240
GSDAPFCESM ASVLSIGEKT MRNCHGNGFH HRTEEQTIPV SCGGCCDNGE EHSSGSSITA  300
SNSAEEGNRA NLQEQAPHNC QPLPPHIPCF IGSPWNYPWN AAQWGSPVVP PPPPPAFCTS  360
SFPISFYTAP AYWGCAVPGT WSIPWLSPPS SSPNNAGCSG SVPHSPTLGK HSRDGNMLKQ  420
SDAEKDETLK QSNPERCLWI PKTLRIDDPG EAAKSSIWAT LGIKNDGKAD TMSSRGFFED  480
FHSKGDVRNQ MAETSPMLHA NPAALSRSLT FHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-103	Dof family protein