PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR83971.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 265aa MW: 30625.3 Da PI: 5.2389 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.3 | 3.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ l+d+++++G g+W++ ++ g+ R++k+c++rw +yl RWR83971.1 14 KGPWTPEEDQVLIDYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.7e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ ++++++ lG++ W++Ia++++ gRt++++k+ w+++l RWR83971.1 67 RGNFSKEEEDTIIRLHEVLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MVRAPCCEKM GMKKGPWTPE EDQVLIDYIQ RYGHGNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDLKRGNF SKEEEDTIIR LHEVLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRVKQNP 120 ATPDTIRQSM KIDECNEHVE IDSNPLKLST HQLFQRPGCI PLSPQQQSSS DLSSSGTDSS 180 IVTTSEYLNR PMKDDQSVDD DENVWWEELS AEKQANLEYS EANPADTQLQ FPSSSLVYRP 240 HNDESMDFWL NLYMEAGEWP ELPEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 9e-76 | MYB family protein |