PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83658.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 709aa MW: 77216.2 Da PI: 7.9077

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.8	4.4e-09	404	441	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + RWR83658.1 404 FEHflHPYPKDSDKVVLAKQTGLTRSQVSNWFINARVR 441 554459******************************88 PP
2	BELL	120.8	5.9e-39	265	336	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis+Fea ag+gsak Yt+lAlk+iS++FrcL+dai+ qi RWR83658.1 265 ERQEIQMKKAKLINMLDEVEQRYRQYHQQMQMVISAFEATAGIGSAKTYTALALKTISKQFRCLRDAIVRQI 336 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MASYFGASEM QSDGLQKLYL MNPGYPGYSS GMETPSTNMI YLNSAGNQLN QGNLPHPTRQ 60 NQQLVGIPVQ AQPAASQDPN RPSLSCSLWT PTNPSMVVAT AQNTHQTAST AAGDGGVIAD 120 MASQLGLRRL SDGPQLVVPS QRGLSLSLSP QKPAYGAYRS ETDIAPAEIS PGGGDDMRIS 180 GSSSSVSAVS NGISSLQSVL TGSKYLKAAQ QLLDEAVNVG NGFKSDDASK GIKGQMKPNR 240 DSPLMEASGG GEVNGKTAAE LTTAERQEIQ MKKAKLINML DEVEQRYRQY HQQMQMVISA 300 FEATAGIGSA KTYTALALKT ISKQFRCLRD AIVRQIRAVS TRLGEEDCFG GGKMEGSSRL 360 RLVDQHLRQQ RALQQLSMMQ QHNAWRPQRG LPERSVSVLR AWLFEHFLHP YPKDSDKVVL 420 AKQTGLTRSQ VSNWFINARV RLWKPMIEEM YLEETKEEEN GSNDKASKSG ISGELASTTQ 480 ENSPVRTEQI NNVKAKSTNI NDPLSNLPNT ASTSTGNAQP QACFSLMGSS SAQASFRDNE 540 GTLQGNRKKT RTVELQNLNS IASMEADLRS DNMDSDKEFY MKFSGERSNR DDYYSITGTA 600 GQQGGFGAYQ IGEMGRFDPE QFAPRFSGGG VSLTLGLPHC ENLSLSRAQQ TYLPNQNISL 660 GRRLDIGNQA NDFASMNTPS VAHSADAYES INIQNRKQFA TQLFPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MASYFGASEM QSDGLQKLYL MNPGYPGYSS GMETPSTNMI YLNSAGNQLN QGNLPHPTRQ  60
NQQLVGIPVQ AQPAASQDPN RPSLSCSLWT PTNPSMVVAT AQNTHQTAST AAGDGGVIAD  120
MASQLGLRRL SDGPQLVVPS QRGLSLSLSP QKPAYGAYRS ETDIAPAEIS PGGGDDMRIS  180
GSSSSVSAVS NGISSLQSVL TGSKYLKAAQ QLLDEAVNVG NGFKSDDASK GIKGQMKPNR  240
DSPLMEASGG GEVNGKTAAE LTTAERQEIQ MKKAKLINML DEVEQRYRQY HQQMQMVISA  300
FEATAGIGSA KTYTALALKT ISKQFRCLRD AIVRQIRAVS TRLGEEDCFG GGKMEGSSRL  360
RLVDQHLRQQ RALQQLSMMQ QHNAWRPQRG LPERSVSVLR AWLFEHFLHP YPKDSDKVVL  420
AKQTGLTRSQ VSNWFINARV RLWKPMIEEM YLEETKEEEN GSNDKASKSG ISGELASTTQ  480
ENSPVRTEQI NNVKAKSTNI NDPLSNLPNT ASTSTGNAQP QACFSLMGSS SAQASFRDNE  540
GTLQGNRKKT RTVELQNLNS IASMEADLRS DNMDSDKEFY MKFSGERSNR DDYYSITGTA  600
GQQGGFGAYQ IGEMGRFDPE QFAPRFSGGG VSLTLGLPHC ENLSLSRAQQ TYLPNQNISL  660
GRRLDIGNQA NDFASMNTPS VAHSADAYES INIQNRKQFA TQLFPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	7e-82	TALE family protein