PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR83431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | C2H2 | ||||||||
Protein Properties | Length: 312aa MW: 33897.3 Da PI: 4.647 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00038 | 286 | 308 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++F++ L +H + H RWR83431.1 286 TCKSCSRTFNSENALDSHTKAkH 308 7*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MEFWGVEVKA GEPVKCDPGF KTYLHLSQAS LGEVKKDKGN DSIPIFVEVN GQKLVLGVLS 60 PDNCTHIPFD LVFEKEFVLS HNWKNGSVYF CGYKSLVLFI ITSDDITDTD TDSEEEAPAL 120 VATQHRKGEV KNEKPKPAID NANAAKIESK PNAKQVELKK VKDEDDDDDE ESDEDEDSDD 180 DEDMVEDEDE SNEDEDGESS DDEEEDTTVK KAETGKKRAA KPAVKTPIPG KKAKLASPIP 240 SGQKKGGDGK KGGHTATPYP SKKGGKTPAS NDKPKLQTPK SGGQVTCKSC SRTFNSENAL 300 DSHTKAKHSA GK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 3e-30 | C2H2 family protein |