PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83410.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 302aa    MW: 33821.4 Da    PI: 5.8732
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.6e-11121164755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + ErrRR r+++++  Lr+l+P+      +K++Ka+i+  A  Y+++Lq
  RWR83410.1 121 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAAMYVQQLQ 164
                 67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MENQTHFNNL SFHDFTNNNM DQITDILRGE NSIVNPITAS YHGNHFHELK FDAGGFVEDG  60
GFCPTPEDMF HLNSASMSDP SSILVALQRC AEDIDVNVGD EYSTATTVRM NCSGDRSRTL  120
ISERRRRGRM KEKLYALRSL VPNITKMDKA SIVGDAAMYV QQLQKQAKKL RGEIAGLEYS  180
LKGGPEQFHG SSDQTLVVGT KKQSIFKKIV QMDVFQVEER GFYVRMVCRK GEGVVVALYK  240
ALESLTCFHV QSSNVAALSD QFVLTFTLNV EVSEDEKDIS TLKLWVMGSL LSQGFEFETP  300
MA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.13e-70bHLH family protein