PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83382.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YB
Protein Properties Length: 207aa    MW: 23235.4 Da    PI: 8.1972
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.12.6e-5342137297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 reqdrf+Pianv+rim+kvlP++akis+daket+q cvse+isf+tsea+dkcqre+rkti+++d+lwa+++lGf++y+epl +yl++yreleg++
  RWR83382.1  42 REQDRFMPIANVIRIMRKVLPTQAKISDDAKETIQVCVSEYISFITSEANDKCQREQRKTITAEDVLWAMSKLGFDNYMEPLIAYLHRYRELEGDR 137
                 89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MNVELNTPKN QNQKQNQYGV GGGALNSTNP DRDGPKLVHT IREQDRFMPI ANVIRIMRKV  60
LPTQAKISDD AKETIQVCVS EYISFITSEA NDKCQREQRK TITAEDVLWA MSKLGFDNYM  120
EPLIAYLHRY RELEGDRRGL LRGEPLLKRA VDQVGQLAAM AYVPAAFHMD LHHQGPFGGG  180
MGAYYRDGSG GNPFQPAIAY DPFAAYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.23e-54NF-YB family protein