PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83269.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 349aa    MW: 38311.9 Da    PI: 7.8687
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.89.4e-14152198354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  RWR83269.1 152 KSHSEAERRRRERINKHLARLRSLLPNT-----TKTDKASLLAEVIQHVKEL 198
                 79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MCGKKVENQG ESSQTIHGFQ TIHEQLLHQN QQHQYNQSYI GGMALPQASS VHSWSVPPDH  60
AFNPVHFSSN RVLDLEHLLP SPSYPSLYNR RAANSSLQFS PYDGSSSNPL GLASGGLVRG  120
CGAGSSPFSL QAELGRMTTQ EILDAKALAA SKSHSEAERR RRERINKHLA RLRSLLPNTT  180
KTDKASLLAE VIQHVKELKR QTSEIGEESP LPTEADELTV DATDEDGKFM IKASLCCDDR  240
SDLLPDLIKT LKALHLRTLK AEITTLGGRM KNVLLITGED DSSGGQHSID SIQEAFKAVM  300
EKTASDDSSS SSSSLKRQRT NCRSCQKAKV IFIPKSKSKS NQACNEESW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158163ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-76bHLH family protein