PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR83249.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 653aa MW: 71029.3 Da PI: 5.96 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.8 | 7.9e-32 | 272 | 329 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk++ers+ d++++e++Y+g+H+h+k RWR83249.1 272 EDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCQVKKQLERSH-DGHITEVVYKGSHDHPK 329 7****************************************.***************85 PP | |||||||
2 | WRKY | 107.1 | 8.8e-34 | 451 | 509 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ RWR83249.1 451 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 509 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 653 aa Download sequence |
MEEDSTSDLQ NSREQDPDSD SSPSELRFEV FHGGNAVLKG ENGRREKSGL GALQTAGSNA 60 ARYKSMSPAS LPISRSPCLT IPPGLSPTSL LESPVMLLDL KAEPSPTTGS FSMPLARHVS 120 INADSASLPR DTTNNSTCDE RSSGEFEFKP HTNAGSGSII SSSGHLVSVG SNYHQSNPFV 180 PFQGQYESQK FVSSSSITME SIKVPSDEFT LPVPASVPPV YTVTSSAIAS AEVADVEPRQ 240 RQGSDSGNLL MYSDNTDSKE SKSLVVADKS SEDGYNWRKY GQKHVKGSEF PRSYYKCTHP 300 NCQVKKQLER SHDGHITEVV YKGSHDHPKP LPGRRSTVGA VLSSQTEELC DGFSSLISAE 360 DKSLNAHGHQ AHQIEPINNF ELSPVSASED DIEVVGARSN RNDDDVDDDD DDDPESKRRK 420 IDIGGTDVIP LIKATREPRV VVQTLSEVDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTNA 480 GCPVRKHVER ASHDPKAVIT TYEGKHNHDV PIGRTSSHDA TGPMIRNDAI APNRHVSPAL 540 NSIRNDDTTK AMMPYCSDRS DGGVVSLDLG VGFSLSPENR SNELQQMPDT QAHGQIEIAG 600 SGCSKLIQAT PVPTYYGRLL KEGVDCYGPR ETPPSNHPTD RSRQNIGRLV MGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G26640.2 | 1e-135 | WRKY family protein |