PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR83092.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | YABBY | ||||||||
Protein Properties | Length: 168aa MW: 18780.3 Da PI: 8.2963 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 199.3 | 1.6e-61 | 6 | 157 | 4 | 170 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102 + +seqvCy+ CnfCn ilavsvPs+ lf +vtvrCGhCt+l svn+a a q l+ ++ ++++ +++ ++s ++v++ ++s RWR83092.1 6 DAASEQVCYMPCNFCNIILAVSVPSSNLFDIVTVRCGHCTNLWSVNMAAALQSLSWQES----KG------PGFTSPDYRIDLA-TSSRCNKVAM-QVS 92 6789******************************************9999998887775....22......2333333332222.2222333333.346 PP YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++e +p ++rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl RWR83092.1 93 ARNNEGIP---AINRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIHFGL 157 66666666...69*****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MSSCIDAASE QVCYMPCNFC NIILAVSVPS SNLFDIVTVR CGHCTNLWSV NMAAALQSLS 60 WQESKGPGFT SPDYRIDLAT SSRCNKVAMQ VSARNNEGIP AINRPPEKRQ RVPSAYNQFI 120 KEEIQRIKAN NPEISHREAF STAAKNWAHF PHIHFGLMLE TNNQAKHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 6e-82 | YABBY family protein |