PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82893.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 323aa MW: 36631.4 Da PI: 4.7292

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	157	200	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N+++ Lr+++P+ + K++ +iL +++Y+k+L RWR82893.1 157 LMAERRRRKRLNDRLTMLRSIVPNiS------KMDRTSILGDTIDYMKEL 200 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MELDEHGFLE ELIGLRRETW ESFPIDMNEL FTNGGSFGCY PENQSLVSPY SSLEGLATSR 60 EKAFGCSLSE VYHPFEDGFP VNEIEFSSKN HVTVAGLNQE DHPSVTEDEN QITYDSLHNS 120 EHGKVELAQE TEIPSFSIGL GPKKRVKKLN GQPSKNLMAE RRRRKRLNDR LTMLRSIVPN 180 ISKMDRTSIL GDTIDYMKEL LGRIKRMQEE IQVGEDQMKW LSILKEQNPN EVIVKNTPKF 240 EVERRNTDTR IEICCTAKPG LLLSTVASLE ALGLEMQQCV ISCFNDFGMQ ASCSEEMEQR 300 AIVSSEDIRQ ALFKNAGYEG SCM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	165	KKRVKKLNGQPSKNLMAERRRRK
2	160	167	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	1e-81	bHLH family protein