PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82785.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 289aa    MW: 30803.2 Da    PI: 6.5343
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-071782191055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  RWR82785.1 178 QARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 219
                 57******************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDPPSLFRIP SSTNGFPAIW PLDSCNLLGI QPRKGHLARN LGFSEPMAAG SARSASAAEE  60
STVTEQSGGG GGGGGGRKRK DVVSASEDET SKLASTSSGN EMQADSNGKR LKFVGSRGEN  120
GDSKEVEASS GNGNKIAEQN AQPSEAPKQD YIHVRARRGQ ATDSHSLAER SVSVGVGQAR  180
REKISERMKI LQDLVPGCNK VIGKALVLDE IINYIQSLQR QVEFLSMKLE AVNSRMSPSM  240
DGFPAKDIGL QSFDTTGLAF TSQATREYGQ DSPPEWLHMQ VGGSFENAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.19e-71bHLH family protein