PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82724.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 302aa MW: 33006.9 Da PI: 8.3174

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.8	2.5e-13	14	78	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT................TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg................kgRtlkqcksrwqkyl 48 rg+W++eEd l ++v+++G+g +W + +++ g ++R++k+c++rw++yl RWR82724.1 14 RGPWSPEEDTALRNYVQKHGTGgNWIALPHKAGrsfnhlpheystliscLKRCGKSCRLRWLNYL 78 89*******************666666666666666666666*99**********97 PP
2	Myb_DNA-binding	42.5	1.6e-13	85	127	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + + G++ W+ Ia++++ gRt++++k++w++ RWR82724.1 85 GGFTEEEDYIICTLYQNIGSR-WSVIASHLP-GRTDNDVKNYWNT 127 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDTALRNYVQ KHGTGGNWIA LPHKAGRSFN HLPHEYSTLI 60 SCLKRCGKSC RLRWLNYLRP DIKHGGFTEE EDYIICTLYQ NIGSRWSVIA SHLPGRTDND 120 VKNYWNTKLK KKLAVMANGA HVTTNNHTQL STSTSPVPGI KSRNHVNCVS TSIDKSLDAA 180 SSIETGSGCN VESQRLYSDS NQFPLRGLKE ISDFGVGANS YGVSSSSFPV DNSCISLSGN 240 GYGEADSFLV DMGYGSAYDP LHGYSSQEKI LEVAPGLANS SYSKWLASAE TKPHGLHQSI 300 TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	1e-69	MYB family protein