PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82702.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 343aa    MW: 37194.6 Da    PI: 7.668
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.81.1e-12104148347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar +   R+  q+ s+ qky
       RWR82702.1 104 PWTEEEHRMFLVGLQKLGKGDWRGIARNFVVSRSSTQVASHAQKY 148
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPA RGGVKLFGVR LTDGSIRKSA SMGSLSSAAH FHSSSSAAAS  60
PNPSSPSSDP LRDPNSHQGY ASDDPTHASS SSSSSSNCRK KGVPWTEEEH RMFLVGLQKL  120
GKGDWRGIAR NFVVSRSSTQ VASHAQKYFI RQNNGIRKKR RSSLFDMVPD MSMDPLPVLE  180
EQFQLHSSPK DESESINQDT PLNLSIDQEC EAMESASNTS PVEPEVQVCH GDFPPMVPAF  240
FPTYLPIPFP FLPPNFFPNG EERGEKHQVL KPTPVLPKDP IQVDELLGLS KLSIGEDAAG  300
HMEPSALSIK LLGASSRQSA FHANPTVGGS DLSPRKSNAI HAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.15e-81MYB_related family protein