PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR82648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 29377.2 Da PI: 4.8523 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.8 | 1.9e-13 | 69 | 112 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR+++N++++ Lr ++P+ + K++Ka+i + A+eYI++L RWR82648.1 69 IVSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIEYIQEL 112 467*********************66......****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MENIGGGVVD EVHEDYNHYW ETKMFLQNEE LFFPNEEIDS WGWDEPISGY YDSSSPDGAA 60 SSSATAKNIV SERNRRKKLN ERLFALRAVV PNISKMDKAS IIKDAIEYIQ ELHNQEKKIQ 120 EEINELERGR QKKLPNPRAQ NEGSSLSTSM KKINDRGYES EGGGGRLSAP IEVLELRVSE 180 VGEKTSVITI TCSKNKDTMV KLCEVFESLK LKIITANITA FPGMLTKTLF VEANEIEKAQ 240 LKEKIEMAIA DIDAPKSPLS F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29930.1 | 6e-72 | bHLH family protein |