PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82647.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 334aa    MW: 36719.9 Da    PI: 4.8513
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.23.5e-16240276135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg +   Tp++Rrgp+g++tLCnaCGl+++ kg+
  RWR82647.1 240 CSHCGISRksTPMMRRGPEGPRTLCNACGLMWATKGT 276
                 *****98888***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEENGNRSSD IDSKEQEIDD QMAKDRISGD HVHMLAAAAE MSLPSQIGDA EGGEVEAAET  60
IQAVAAQPLQ VHYMQREAEG GGAGEEQGGE VEGDDGEEAG EGMVVEVPVE DEEHVGVMTR  120
SQTANRLTLS FQDDVYIFDC IPPEKVQAVL LLLGGREITL GAVNKRKNLR ERAVSLNRFR  180
AKRQERNYTR KVRYNVRKQV ALRMQRYKGQ FTSSKATEDG TLEERLAMRR ASSPPRATEC  240
SHCGISRKST PMMRRGPEGP RTLCNACGLM WATKGTLRNL SKDYSPVSSQ NPLANLNDEL  300
EPMDVQPLGI QQSNLEIVQT PPPSNAAANG HEDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.22e-60GATA family protein