PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR82574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WRKY | ||||||||
Protein Properties | Length: 505aa MW: 54316.2 Da PI: 7.6744 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.9 | 1.1e-24 | 123 | 179 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 D ynWrKYG K+vkg e++rsYYrC++a+C vkk+v r+ ++v+ei+Y+g+Hnh+ RWR82574.1 123 ADCYNWRKYGEKQVKGIECSRSYYRCSHADCDVKKNVVRCY-SGHVIEIMYKGRHNHD 179 699**************************************.9**************7 PP | |||||||
2 | WRKY | 102.9 | 1.8e-32 | 325 | 382 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vkg+++prsYY+Ct+ +Cpv+++ver+++d k+++itYeg+Hnhe RWR82574.1 325 SDGYKWRKYGQKIVKGNPNPRSYYKCTYDECPVRRHVERASDDAKTLVITYEGKHNHE 382 7********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence |
MAENQSSKPS SSSSSSSGCV CSLLALARAK DPANSSPSGS EVANSPATTL SGDSLSGSQG 60 QFVMSHQEAL ASVMAEAQMK LQAVHPSSSP KLPQNSPVPA VLSAFKPILQ QQRPEPVLEE 120 TPADCYNWRK YGEKQVKGIE CSRSYYRCSH ADCDVKKNVV RCYSGHVIEI MYKGRHNHDP 180 PQKNKYTKES SVPCSDLFGE SESANLPVET TNRSNSPAPR RDQSAALATS EQQLHYPINC 240 DGGAGIRVKY DDGREPKRRP GCPCRHCSAP GASGGDRSGS SKRTDRVESA GYHLTWMVTY 300 LTPLLKTTGE SKVVLQTASD LGTFSDGYKW RKYGQKIVKG NPNPRSYYKC TYDECPVRRH 360 VERASDDAKT LVITYEGKHN HEPPGSKKED PKVPVETAEG KQNHESSASE KGAAKAHAIT 420 HEGKENPGLP ASENSNVSQG TALLIAAAVA AAAEGQLTKS NHVQIQESTA QVPSDREDEV 480 SEKSLDLGGD KALESAQTLL SIGST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.2 | 4e-60 | WRKY family protein |