PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82448.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 416aa MW: 45242.4 Da PI: 6.7128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.3	3.6e-05	310	348	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq RWR82448.1 310 RKEKLGDRIAALQQLVAPF-----GKTDTASVLLEAIGYIKFLQ 348 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MESANLGHLH QLQEQVGGGS SSLAVPSING VGSNNSWNQN LLLNGCNYNS NFNGVLSNAR 60 DLRNNNDILV HPSLNTSMLQ DLGFQWASSA ENYSNHPTND LQLSKIKEEL TDSFPKFGEH 120 STLEDIHSPS TSYIKQEQQF LRDLNEKLLL RNFSSGCQVN GGFQTSSGDF YSNPQSITSF 180 GTLATASVRG NYSRILPTAN ISSVNPPLSP FPTSLGMNLQ ALDLLASTKA GVNFSQPLLN 240 NLGSFKGLPF GLDHLQESSQ GPSTNCHKIS FMDGAAETKR GLGISEPKAS QTQPKKPRFE 300 SRSLPPFKVR KEKLGDRIAA LQQLVAPFGK TDTASVLLEA IGYIKFLQDQ VETLSVPYMK 360 NNACRMAQSG SSDEEQKEEP RDLRSRGLCL VPLSCTSYVT NDNGSVWSPP NYSGGT

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MESANLGHLH QLQEQVGGGS SSLAVPSING VGSNNSWNQN LLLNGCNYNS NFNGVLSNAR  60
DLRNNNDILV HPSLNTSMLQ DLGFQWASSA ENYSNHPTND LQLSKIKEEL TDSFPKFGEH  120
STLEDIHSPS TSYIKQEQQF LRDLNEKLLL RNFSSGCQVN GGFQTSSGDF YSNPQSITSF  180
GTLATASVRG NYSRILPTAN ISSVNPPLSP FPTSLGMNLQ ALDLLASTKA GVNFSQPLLN  240
NLGSFKGLPF GLDHLQESSQ GPSTNCHKIS FMDGAAETKR GLGISEPKAS QTQPKKPRFE  300
SRSLPPFKVR KEKLGDRIAA LQQLVAPFGK TDTASVLLEA IGYIKFLQDQ VETLSVPYMK  360
NNACRMAQSG SSDEEQKEEP RDLRSRGLCL VPLSCTSYVT NDNGSVWSPP NYSGGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	9e-64	bHLH family protein