PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82202.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CPP

Protein Properties

Length: 895aa MW: 98167.4 Da PI: 6.1339

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	6.6e-16	602	640	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C C+dC+Nk RWR82202.1 602 SCKRCNCKKSKCLKLYCECFAAGVYCVEPCLCQDCFNKP 640 689**********************************96 PP
2	TCR	53	6.6e-17	687	726	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++kkgCnCkks+ClkkYCeCf+ g+ Cs++C+Ce+CkNk RWR82202.1 687 RHKKGCNCKKSSCLKKYCECFQGGVGCSSDCRCEGCKNKF 726 589***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MLFLNVLEKG SWAVGPCSSK CEKPSPSRFL PASCSPLIQQ HRQKTKKKQK DIGGGMDPSS 60 SLSDMDTPDR NHIEKPISTV EESPVFNYIS NLSPIEPVKS VHITQSFQSL NFSSIPAVFT 120 SPHISTQKES KYLRKYQFVD LSKPDFSPEV GDERKASSGV SLSALLPNRS ADVHEQCNVG 180 ASIEEFNVVP PTERKKLAIK LCQTLKYDCG SSRKNDTSCN DAKMGNEASI SATPASLVQC 240 LTEGPEENRS TLETKVESKG TCRLEQAEEE RVGCDWENLI SDAATNDLLN LVGSTESDAC 300 RVQDNEFADS GSNANSFLSL LSRPPEDKID SSQEARPEVD CREQDQKLVD SDPNSFASSI 360 LRSPEDNIDD SQETQPLGFQ NHAIQDPGSH HPGEVGELNE TDHTPEILLS SHQCEQGTRD 420 PHEKMDGEAR DYVSLGCKVL SQQQRGMRRR CLVFEVGGVH KKSLEDDPKR RHSNKLQCDG 480 KSVADDKQSA SHMTGTGSSP RKLPGIGLHL NALATTSKGS GVAKHETLSS GRRLISMPKP 540 VGSFHSLTGV QQPLDKSLAM ISIEGESSQV MKEAQGVQDV FQVPEFGGGE ERRLESAGES 600 ESCKRCNCKK SKCLKLYCEC FAAGVYCVEP CLCQDCFNKP VHEDTVLATR KQIESRNPLA 660 FAPKVIRSSE SVVNTGVESN KTPASARHKK GCNCKKSSCL KKYCECFQGG VGCSSDCRCE 720 GCKNKFGTNG SDRSAPKGIE EQEGEESEPA ENDGQNELLM IEYQEEEIQY SGALPFTHSF 780 RNCSFEPLAV ASSPCLENTS QMVRDFDSLH PKPQFEKHHQ NVPEDETPEI LRGDCSPINA 840 VKTSSPNRKR VSPPHNNFGS SSGRRGVGDS VLQSIPPFPS LTPHHGRNNF LRKFQ

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MLFLNVLEKG SWAVGPCSSK CEKPSPSRFL PASCSPLIQQ HRQKTKKKQK DIGGGMDPSS  60
SLSDMDTPDR NHIEKPISTV EESPVFNYIS NLSPIEPVKS VHITQSFQSL NFSSIPAVFT  120
SPHISTQKES KYLRKYQFVD LSKPDFSPEV GDERKASSGV SLSALLPNRS ADVHEQCNVG  180
ASIEEFNVVP PTERKKLAIK LCQTLKYDCG SSRKNDTSCN DAKMGNEASI SATPASLVQC  240
LTEGPEENRS TLETKVESKG TCRLEQAEEE RVGCDWENLI SDAATNDLLN LVGSTESDAC  300
RVQDNEFADS GSNANSFLSL LSRPPEDKID SSQEARPEVD CREQDQKLVD SDPNSFASSI  360
LRSPEDNIDD SQETQPLGFQ NHAIQDPGSH HPGEVGELNE TDHTPEILLS SHQCEQGTRD  420
PHEKMDGEAR DYVSLGCKVL SQQQRGMRRR CLVFEVGGVH KKSLEDDPKR RHSNKLQCDG  480
KSVADDKQSA SHMTGTGSSP RKLPGIGLHL NALATTSKGS GVAKHETLSS GRRLISMPKP  540
VGSFHSLTGV QQPLDKSLAM ISIEGESSQV MKEAQGVQDV FQVPEFGGGE ERRLESAGES  600
ESCKRCNCKK SKCLKLYCEC FAAGVYCVEP CLCQDCFNKP VHEDTVLATR KQIESRNPLA  660
FAPKVIRSSE SVVNTGVESN KTPASARHKK GCNCKKSSCL KKYCECFQGG VGCSSDCRCE  720
GCKNKFGTNG SDRSAPKGIE EQEGEESEPA ENDGQNELLM IEYQEEEIQY SGALPFTHSF  780
RNCSFEPLAV ASSPCLENTS QMVRDFDSLH PKPQFEKHHQ NVPEDETPEI LRGDCSPINA  840
VKTSSPNRKR VSPPHNNFGS SSGRRGVGDS VLQSIPPFPS LTPHHGRNNF LRKFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	8e-72	CPP family protein