PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82042.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 789aa MW: 86588.5 Da PI: 5.9455

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.1	3.5e-09	498	535	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + RWR82042.1 498 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 535 664459******************************88 PP
2	BELL	125.2	2.5e-40	361	432	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+k +kLls+l+eVdkrYkqy+ q+q+v+ssF+++ag+g+akpYt+lAl++iSrhFr+L+dai++qi RWR82042.1 361 ERQDLQNKMTKLLSMLDEVDKRYKQYYRQMQIVVSSFDMIAGCGAAKPYTALALQTISRHFRSLRDAISSQI 432 799********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 789 aa Download sequence
MATYYNTSNQ RDVMPTLYLG DPGHAPYPES SLPSSMVYMN YSSAGSYSDH LASNSQPQQN 60 CVELPVPTAM LSQDSSVGPS VSASSHQGIL SNLVSSRLGE QAYGVWRDGR NEMVFMQPTS 120 ALTTMQAISG QMNDNTDDLV RHPGREETHM DFRTQLGILQ SGQSFQSQRP DVSAIQGQGL 180 SLSLSTQIPS TIQVPSFQYH RHTNEDISFL GSHQSTSGDG GLCRDDGSHT KQSRNAEFPP 240 AYSGGGHPIK GEILGSNPQC SAALKQMNMD PSYGFAGLSS TIPNSKYLKA AQQLLDEVVN 300 VRKALKQDSE KRQSFNMSVG ISGSKDTDGG SKGGALPTTD GIPANPQDST SNSTNELSPA 360 ERQDLQNKMT KLLSMLDEVD KRYKQYYRQM QIVVSSFDMI AGCGAAKPYT ALALQTISRH 420 FRSLRDAISS QIKATRKSLG EQDSSSCKVG GISRLRFVDQ QLRQQRALQQ IGMIQQHAWR 480 PQRGLPESSV SILRAWLFEH FLHPYPKDSD KIMLARQTGL TRSQVSNWFI NARVRLWKPM 540 VEEMYKEEIG DADVDSNSSS DNATKVRSEA KASEDREELQ SMKSAVENCP TSSYDGNMKS 600 DHISDIDMDG TTPGLQNGVN LDDPNYGNLK LRDQGSNTND CSLLQDALIQ PDGNGRFMAY 660 QMAELGRFGN GGVSLTLGLQ HCDGGLPVSG GEQNFITVRG GDEMFGTASD RADAAEYDCM 720 NLGNRRHRDG PTGAGQKETE ITIITKLRHE SLWLIELYFF LIFSLTVCSV SGKCLFSVME 780 IWFVISISP

Sequence ? help Back to Top

Protein Sequence Length: 789 aa Download sequence

MATYYNTSNQ RDVMPTLYLG DPGHAPYPES SLPSSMVYMN YSSAGSYSDH LASNSQPQQN  60
CVELPVPTAM LSQDSSVGPS VSASSHQGIL SNLVSSRLGE QAYGVWRDGR NEMVFMQPTS  120
ALTTMQAISG QMNDNTDDLV RHPGREETHM DFRTQLGILQ SGQSFQSQRP DVSAIQGQGL  180
SLSLSTQIPS TIQVPSFQYH RHTNEDISFL GSHQSTSGDG GLCRDDGSHT KQSRNAEFPP  240
AYSGGGHPIK GEILGSNPQC SAALKQMNMD PSYGFAGLSS TIPNSKYLKA AQQLLDEVVN  300
VRKALKQDSE KRQSFNMSVG ISGSKDTDGG SKGGALPTTD GIPANPQDST SNSTNELSPA  360
ERQDLQNKMT KLLSMLDEVD KRYKQYYRQM QIVVSSFDMI AGCGAAKPYT ALALQTISRH  420
FRSLRDAISS QIKATRKSLG EQDSSSCKVG GISRLRFVDQ QLRQQRALQQ IGMIQQHAWR  480
PQRGLPESSV SILRAWLFEH FLHPYPKDSD KIMLARQTGL TRSQVSNWFI NARVRLWKPM  540
VEEMYKEEIG DADVDSNSSS DNATKVRSEA KASEDREELQ SMKSAVENCP TSSYDGNMKS  600
DHISDIDMDG TTPGLQNGVN LDDPNYGNLK LRDQGSNTND CSLLQDALIQ PDGNGRFMAY  660
QMAELGRFGN GGVSLTLGLQ HCDGGLPVSG GEQNFITVRG GDEMFGTASD RADAAEYDCM  720
NLGNRRHRDG PTGAGQKETE ITIITKLRHE SLWLIELYFF LIFSLTVCSV SGKCLFSVME  780
IWFVISISP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-118	TALE family protein