PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81983.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ARR-B
Protein Properties Length: 278aa    MW: 31685.2 Da    PI: 5.7302
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like42.81.2e-13213265155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +pr+rW   LH++F + v+ + G+++A   t+lelm+v+gLt+e+v+ HL  YRl
  RWR81983.1 213 QPRIRWH-LLHNHFASLVNLI-GIDRAEADTLLELMDVPGLTREDVATHLEIYRL 265
                 589***6.6**********99.********************************8 PP
2Response_reg79.51.1e-26281361109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +l+vdD+p+ +++l+++l+k +y ev+++++++ al ll+ k+  +D++l+D+ mp++dG++ll+ i   e++lp+++++a  +++ a + l+ Ga 
    RWR81983.1  28 ILVVDDDPTYLMVLAKMLRKRRY-EVTTCEHATIALSLLRGKRakYDIVLTDVHMPDVDGFKLLE-IVGLEMDLPVLMMSADCDMNVAMRGLECGAC 122
                   89*********************.***************777777*******************7.5556679************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                    +++Kp+++ e+ +
    RWR81983.1 123 YYFVKPISIHEIKN 136
                   *********99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MKDFSSMESE GDLSSSSTLC SVPFRLHILV VDDDPTYLMV LAKMLRKRRY EVTTCEHATI  60
ALSLLRGKRA KYDIVLTDVH MPDVDGFKLL EIVGLEMDLP VLMMSADCDM NVAMRGLECG  120
ACYYFVKPIS IHEIKNIWQH LIRKKKIDNK EIGQIGSVGK VEVENTSKKA LEDGECASTV  180
HEGSSEKHYK RKNQVEEDED GGDDSEEHRV QRQPRIRWHL LHNHFASLVN LIGIDRAEAD  240
TLLELMDVPG LTREDVATHL EIYRLYLHKV NENSLASY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.18e-66ARR-B family protein