PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81878.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 1024aa MW: 115760 Da PI: 8.0222

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	90.7	2e-28	91	180	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn+YA +vGF r+s++++s+++ge++ r+fvC keg+r +++ + ++rr+ra+tr gC a++ +kk++ gkw v+k+++eHnH+l RWR81878.1 91 FYNAYAMQVGFGSRVSRNRRSRKDGETIARNFVCCKEGFRLRRHGDnGGRARRNRANTREGCMAMISIKKTNLGKWAVSKFVKEHNHPLL 180 9*************************************9988774678999*********************************96 PP
2	FAR1	91.5	1.1e-28	240	329	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA+++GF+ r+sk+++s++ngei+ rtfvC+keg+r +++++ +++ r+ra tr gC+a+++vkk++++kw+++k+++eH+H+l RWR81878.1 240 FYSAYARRTGFRSRISKNRRSRKNGEIIARTFVCYKEGYRLNRHDSkKDRIYRPRAITREGCEAMIMVKKTSSAKWVIAKFVKEHSHPLL 329 9************************************99888773566678*********************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence
MESAMNQDNP LVEFHVGSQV DNAEGTMAHD VEHHVSEENK VMESSDGCTG TDDKMGCSTE 60 TDPKLNVGEG TSIQEPYVGM EFESEEAARL FYNAYAMQVG FGSRVSRNRR SRKDGETIAR 120 NFVCCKEGFR LRRHGDNGGR ARRNRANTRE GCMAMISIKK TNLGKWAVSK FVKEHNHPLL 180 SPSEVRSLRS HRNVSDSSKK SDAEPHVDDD LEMIEHFEGA ENLEPFEGME LESEEAARIF 240 YSAYARRTGF RSRISKNRRS RKNGEIIART FVCYKEGYRL NRHDSKKDRI YRPRAITREG 300 CEAMIMVKKT SSAKWVIAKF VKEHSHPLLD PSNMRGLRSH NVSGSSKKPT EGATRRKDAS 360 DVMSGVVAKD GESDNAGSTE PVRSNHIEAL RKRKRFPDKD PQDVIDYLER MQSENPAFFY 420 AAKIDVDETL HCIFWVDARS RMAYNYFGDV VHFDTNYKTD QYEVPFAPFT GVNHHQQSTL 480 FGCALLFDEA ESTFVWLFNS WLEAMSGRHP VTIITDQDEV IGEAIAQVFP KTHHCFCKWD 540 ILYKAPKQLA NVERSHPTFR GEFQKCVNLT ETVHEFESCW KSLIDKFGLK KNQWLRSLYS 600 ARQKWAPVYL QNTFIAQISA TQQSESTNSY FDGYVFSNTS MQDFVMQYER ALASRYEMEL 660 EEDIRTTHTK PSLKTTLPIE KQAANTYTRT VFLKFQEEVF ESLGYVANKV KEEEAVSTYE 720 VTTFEEHERA RTVMFNASER RASCSCLMFE FSGVLCRHAL IVFTLSNFMT LPSYYILERW 780 TRNAKSVVGL DKRGVAMQAN CRKSPTLRHS FLCKQAIRCA EVGATSVQDY DVAMRALREA 840 WEKIVASKNK GVGVGQLDTQ VSGSLQGPSS NAHIEMHNIT NRMTLGNLQQ PKKRGRPRKS 900 TSKPDAEKAI KNIKKCAICK EHGHDDSNCP RLRPIGGSFG TGGGMILMDT GPSELHGHGG 960 LGGEQLGFSE GILGLSLGDR FDSHVTSGIP NFGPNNFFQI SLANSRLFNV NEEFSLTGAR 1020 PSGP

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence

MESAMNQDNP LVEFHVGSQV DNAEGTMAHD VEHHVSEENK VMESSDGCTG TDDKMGCSTE  60
TDPKLNVGEG TSIQEPYVGM EFESEEAARL FYNAYAMQVG FGSRVSRNRR SRKDGETIAR  120
NFVCCKEGFR LRRHGDNGGR ARRNRANTRE GCMAMISIKK TNLGKWAVSK FVKEHNHPLL  180
SPSEVRSLRS HRNVSDSSKK SDAEPHVDDD LEMIEHFEGA ENLEPFEGME LESEEAARIF  240
YSAYARRTGF RSRISKNRRS RKNGEIIART FVCYKEGYRL NRHDSKKDRI YRPRAITREG  300
CEAMIMVKKT SSAKWVIAKF VKEHSHPLLD PSNMRGLRSH NVSGSSKKPT EGATRRKDAS  360
DVMSGVVAKD GESDNAGSTE PVRSNHIEAL RKRKRFPDKD PQDVIDYLER MQSENPAFFY  420
AAKIDVDETL HCIFWVDARS RMAYNYFGDV VHFDTNYKTD QYEVPFAPFT GVNHHQQSTL  480
FGCALLFDEA ESTFVWLFNS WLEAMSGRHP VTIITDQDEV IGEAIAQVFP KTHHCFCKWD  540
ILYKAPKQLA NVERSHPTFR GEFQKCVNLT ETVHEFESCW KSLIDKFGLK KNQWLRSLYS  600
ARQKWAPVYL QNTFIAQISA TQQSESTNSY FDGYVFSNTS MQDFVMQYER ALASRYEMEL  660
EEDIRTTHTK PSLKTTLPIE KQAANTYTRT VFLKFQEEVF ESLGYVANKV KEEEAVSTYE  720
VTTFEEHERA RTVMFNASER RASCSCLMFE FSGVLCRHAL IVFTLSNFMT LPSYYILERW  780
TRNAKSVVGL DKRGVAMQAN CRKSPTLRHS FLCKQAIRCA EVGATSVQDY DVAMRALREA  840
WEKIVASKNK GVGVGQLDTQ VSGSLQGPSS NAHIEMHNIT NRMTLGNLQQ PKKRGRPRKS  900
TSKPDAEKAI KNIKKCAICK EHGHDDSNCP RLRPIGGSFG TGGGMILMDT GPSELHGHGG  960
LGGEQLGFSE GILGLSLGDR FDSHVTSGIP NFGPNNFFQI SLANSRLFNV NEEFSLTGAR  1020
PSGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein