PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81787.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NF-YB

Protein Properties

Length: 223aa MW: 24735 Da PI: 8.9033

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.5	5.5e-55	89	181	2	94
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 reqdrflPian+srimkk +P+n+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+ tlGfedy++plkvyl+k+re + RWR81787.1 89 REQDRFLPIANISRIMKKGVPTNGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMMTLGFEDYIDPLKVYLHKFREDD 181 89****************************************************************************************966 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MPTACNDLER TAEETDGLDR TAEFPLAISR PIRLIRSFLS LSCAAKQQKK ISLHSLARVI 60 KKSRMADLPT SPGGSSHESG DRSPRFSIRE QDRFLPIANI SRIMKKGVPT NGKIAKDAKE 120 TVQECVSEFI SFITSEASDK CQREKRKTIN GDDLLWAMMT LGFEDYIDPL KVYLHKFRED 180 DTKGSAKSGD GSGKKDAVGV QVDPNSQIAY QGSFTQGVNY MHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	7e-65	NF-YB family protein