PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81755.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family BBR-BPC
Protein Properties Length: 340aa    MW: 37498.6 Da    PI: 9.9992
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind378.51.1e-11513401301
   GAGA_bind   1 mdddgsre..rnkg.yye..........paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalll 86 
                 mdd g+re  r+k+ +y+          p+ ++k++ +++lms+iaerda+ +ern+a++ekkaa+aerdma lqrd+a+aern+a++erd+++ al++
  RWR81755.1   1 MDDGGQREngRHKPdQYKgvhsqwtplgPH-QMKDHHTIKLMSIIAERDAAYQERNIAIAEKKAALAERDMAILQRDAAIAERNNAIIERDSAISALEY 98 
                 99***99999************99987655.9******************************************************************9 PP

   GAGA_bind  87 vensla..salpvgvqvlsgtksidslqqlse.pqledsave.lreeeklealpieeaaeeakekkkkkkr..qrakkpkekkakkkkkksekskkkvk 179
                 ++++ +  s ++   +v +gtk+ ++ +++ +  +++d+a   +re+ ++ea pi+ a e a + ++ k++   +a+ p + ka+k+++k++k  ++ +
  RWR81755.1  99 ARENGMnsSGTACPPGVPRGTKHGHHPHHVAHaLHMGDTAPYhAREMPITEAIPISVASEAAAKPRRAKRKkdTKAQLPSSVKASKPRRKGKKGGEDLN 197
                 8887773433444557899*******99976668998876555************99888777766555440044555666677777777777777766 PP

   GAGA_bind 180 kesader.....................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiag 257
                 k+ +  +                     +k+e+k +dl+ln+vs+De+++PvPvCsCtG+++qCYkWGnGGWqSaCCttt+S+yPLP ++++r+aRi+g
  RWR81755.1 198 KQVSGAKqlewkghelmgcedlnkqlsvTKHEWKGQDLGLNQVSFDETSMPVPVCSCTGSSQQCYKWGNGGWQSACCTTTLSMYPLPLMPNKRHARIGG 296
                 666653358899*************************************************************************************** PP

   GAGA_bind 258 rKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 rKmS++af+klL++LaaeG+dls pvDLkdhWAkHGtn+++ti+
  RWR81755.1 297 RKMSGSAFTKLLSRLAAEGHDLSVPVDLKDHWAKHGTNRYITIK 340
                 *******************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MDDGGQRENG RHKPDQYKGV HSQWTPLGPH QMKDHHTIKL MSIIAERDAA YQERNIAIAE  60
KKAALAERDM AILQRDAAIA ERNNAIIERD SAISALEYAR ENGMNSSGTA CPPGVPRGTK  120
HGHHPHHVAH ALHMGDTAPY HAREMPITEA IPISVASEAA AKPRRAKRKK DTKAQLPSSV  180
KASKPRRKGK KGGEDLNKQV SGAKQLEWKG HELMGCEDLN KQLSVTKHEW KGQDLGLNQV  240
SFDETSMPVP VCSCTGSSQQ CYKWGNGGWQ SACCTTTLSM YPLPLMPNKR HARIGGRKMS  300
GSAFTKLLSR LAAEGHDLSV PVDLKDHWAK HGTNRYITIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164171RRAKRKKD
2167191KRKKDTKAQLPSSVKASKPRRKGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-96BBR-BPC family protein