PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81551.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 300aa    MW: 34021.9 Da    PI: 9.7696
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.6e-092874347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE + + +a + + ++   +W +Ia++++ g+t  ++  ++ ++
       RWR81551.1 28 NWTQEENKEFENALAFFDKEtpdRWQRIAARIP-GKTVADVYRHYKDL 74
                     7*****************99*************.***********875 PP
2Myb_DNA-binding47.63.8e-15133177347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
       RWR81551.1 133 PWTEEEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 177
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MMKWEVLSPA SFVTNSNWLF DHEGKMANWT QEENKEFENA LAFFDKETPD RWQRIAARIP  60
GKTVADVYRH YKDLEDDVSV IEAGLIPIPG YSASSFTLEW VNNRDFEGLK SPYAVGGKRS  120
AARPDQERKK GVPWTEEEHR LFLMGLKKYG KGDWRNISRN FVTTRTPTQV ASHAQKYFIR  180
QCSGGKDKRR SSIHDITTVN ITDTRPPSPS QSTNISVRPG SASARKTSDH FSVLYDSNQS  240
NEGAMVFSPT SSHAHGNFFT APPFGITSYG MKLQTQNFQR STLHESQVFQ LQSSHLHPRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-102MYB family protein