PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR81418.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 159aa MW: 18060 Da PI: 7.5319 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.3e-17 | 30 | 79 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g RWR81418.1 30 PYRGIRKRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 79 69****999.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MEGDSRSSTE SPQQQRHRAA GKTPLPGEKP YRGIRKRKWG KWVAEIREPN KRSRIWLGSY 60 STPVAAARAY DTAVFYLRGR SARLNFPEFA GADDDEELPD LSAASIRKKA TEVGARVDAI 120 ETRLRVPTEI SSRRSRSEKP DLNQIPEPET SDEEEEEEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46768.1 | 2e-46 | ERF family protein |