PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81092.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 318aa    MW: 36710 Da    PI: 7.0583
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81092.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix86.63e-2755136186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++qe+++ i++r e+e+++  +k++k+lWe+v++km+e g++rsp+qCk+kw+nl +ryk  ++++ ++     ++cp+fd+l+
  RWR81092.1  55 QWSHQETRDFIAIRAELERDFTLAKRNKTLWEAVAAKMKEMGYRRSPEQCKCKWKNLVNRYKGKETSDPDN----GRQCPFFDELH 136
                 7**************************************************************99999984....678******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MMFGSGDNES PVGVGGQMGM IPGLPLQLNP TGMVSGGGGG GGGGSSTHKE ERVPQWSHQE  60
TRDFIAIRAE LERDFTLAKR NKTLWEAVAA KMKEMGYRRS PEQCKCKWKN LVNRYKGKET  120
SDPDNGRQCP FFDELHAIFT ERAKNMQRML RESEAGGGGT SSTQAKKKMK RPSGERSSED  180
LSEEDNDDED ESEEERSSSL ARSGKRKAYR ERPLRTTATA ERSRTSGSGI LEVLQDWFRQ  240
QQHMEMQWQD MMDKRAQERQ LFEQEWRISM EKLERERLLL EQAWREREEQ RRLREESRAE  300
KRDALLTTLL NKLIHEDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.12e-32Trihelix family protein