PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81090.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 319aa    MW: 36767.1 Da    PI: 7.0583
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix86.63.1e-2756137186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++qe+++ i++r e+e+++  +k++k+lWe+v++km+e g++rsp+qCk+kw+nl +ryk  ++++ ++     ++cp+fd+l+
  RWR81090.1  56 QWSHQETRDFIAIRAELERDFTLAKRNKTLWEAVAAKMKEMGYRRSPEQCKCKWKNLVNRYKGKETSDPDN----GRQCPFFDELH 137
                 7**************************************************************99999984....678******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MMFGSGDNES PVGVGGQMGM IPGLPLQLNP TGMVSGGGGG GGGGGSSTHK EERVPQWSHQ  60
ETRDFIAIRA ELERDFTLAK RNKTLWEAVA AKMKEMGYRR SPEQCKCKWK NLVNRYKGKE  120
TSDPDNGRQC PFFDELHAIF TERAKNMQRM LRESEAGGGG TSSTQAKKKM KRPSGERSSE  180
DLSEEDNDDE DESEEERSSS LARSGKRKAY RERPLRTTAT AERSRTSGSG ILEVLQDWFR  240
QQQHMEMQWQ DMMDKRAQER QLFEQEWRIS MEKLERERLL LEQAWREREE QRRLREESRA  300
EKRDALLTTL LNKLIHEDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.12e-32Trihelix family protein