PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR81081.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 158aa MW: 18149.8 Da PI: 10.3349 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.1 | 9.8e-19 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+++vk +G + W++ ++ g++R++k+c++rw +yl RWR81081.1 17 RGAWTAEEDRKLAEYVKIHGDKKWRSLPANAGLNRCGKSCRLRWMNYL 64 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 70 | 115 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+++++++ G++ W++Ia +++ gRt++++k++w+++l RWR81081.1 70 RGNISEDEEDLIIRLHNLIGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 115 7899******************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 158 aa Download sequence |
MVKKTESNFL PKKKVIRGAW TAEEDRKLAE YVKIHGDKKW RSLPANAGLN RCGKSCRLRW 60 MNYLRPGIKR GNISEDEEDL IIRLHNLIGN RWSLIAGRLP GRTDNEIKNH WNTHLSKKSL 120 TMNELNLKLN HKVETNVDCS SPSSSAISAP DMNWAYPD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G35550.1 | 4e-55 | MYB family protein |