PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81054.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family BBR-BPC
Protein Properties Length: 280aa    MW: 30377.2 Da    PI: 10.0228
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind252.62.4e-777228093301
   GAGA_bind  93 salpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaeeakekk.kkkkrqrakkpkekkakkkkkksekskkkvkkesaderska 189
                 ++  ++ + ls+tk   +  q  e +l+d  +      + +++ + e ++ e k+++ + kk++++   k+ + k+ kk+++  +k++ ++    ++k 
  RWR81054.1  72 TNWVNQKNYLSETKASPNQMQAIEADLADIHMVlGASVDATQNGKFEAKPAELKKQQpSAKKSNQQFASKVLRPKQSKKNPSPLTKRQGSSV--ASAKC 168
                 22233444455555444333344455555444422233333333333332222222202222223333333444444443333333332222..569** PP

   GAGA_bind 190 ekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdh 288
                 ekk++d v+ng +lD+s++P+P+CsCtG++r+CY+WG+GGWqS+CCt++iS yPLP+s+ r+ aR+agrKmS+ga++klLe+La+eG++lsnpvDLkdh
  RWR81054.1 169 EKKNTDAVVNGTTLDISRVPPPICSCTGVPRRCYRWGSGGWQSSCCTLSISEYPLPMSPSRPTARMAGRKMSSGAYSKLLERLATEGFSLSNPVDLKDH 267
                 *************************************************************************************************** PP

   GAGA_bind 289 WAkHGtnkfvtir 301
                 WA+HGtnk+ ti+
  RWR81054.1 268 WARHGTNKYATIK 280
                 ************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDEKGVSGIR NWDFSDQGAN VSSVFKPISN AGVHGGAIFD GSSGVSEYQS TFLKMNAFSD  60
RNSMTSEAAE LTNWVNQKNY LSETKASPNQ MQAIEADLAD IHMVLGASVD ATQNGKFEAK  120
PAELKKQQPS AKKSNQQFAS KVLRPKQSKK NPSPLTKRQG SSVASAKCEK KNTDAVVNGT  180
TLDISRVPPP ICSCTGVPRR CYRWGSGGWQ SSCCTLSISE YPLPMSPSRP TARMAGRKMS  240
SGAYSKLLER LATEGFSLSN PVDLKDHWAR HGTNKYATIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.11e-61BBR-BPC family protein