PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81016.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 327aa    MW: 37028 Da    PI: 6.2395
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52.1e-12114165155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h  +Er+RR+ +N+ ++ Lr+l+P +   + ++ + a+i+  A++++k+L+
  RWR81016.1 114 QRMTHITVERNRRRLMNEHLAALRSLMPDS---YIQRGDQASIVGGAIDFVKELE 165
                 79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MAMEALASCN VDLSNFIVHE TISATENHYN ASQTLPTSLL FESKVTHFMS NNPHFNASNL  60
FEIGGKSESS SLPMLGRFET SESKETGLNS TTQGRKKRRR MPRACKNQEE AETQRMTHIT  120
VERNRRRLMN EHLAALRSLM PDSYIQRGDQ ASIVGGAIDF VKELEQLLQS LEAQKRMLAQ  180
QQQERENKSE SNIESLAPPF AQFFTYPQFL WCQIHGDREK PNEIRRAVAD IEVTMIETHA  240
NLKILSIKRP RQIIRMLAGF QTLHLPILHL NVTTLDPFVL YSISAKVEEG CHLNSADEIA  300
AAVHQMFTII ADEAALRCEE EEAATDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115126RMTHITVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.17e-62bHLH family protein