PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81006.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 425aa    MW: 47839.1 Da    PI: 6.2483
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA38.51.5e-12332635
        GATA  6 ttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                +t TplWR+gp  ++ LCnaCG ++r kg+
  RWR81006.1  3 STATPLWRNGPPEKPVLCNACGSRWRTKGT 32
                588********88888***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MYSTATPLWR NGPPEKPVLC NACGSRWRTK GTLTNYTPLH ARVEPTDSEN YRKVGVVKPI  60
IIKTKEKKLQ KRKLLNDNAE LSGEALIFDQ NFRRVYEEDT TNRSSSGSAT SYSESCVHVG  120
STDASDLTDL YSILHQQQSS CLTGSLEEDL LFETGTLMDS VEIGHGGVLI KHLNVVARDE  180
ESVASSLPID SKEYITMNTY SRSAFLPAPI ANKGISTPKI GNEKVKRFAA TGPQQAAQEH  240
TKRDKFSHDK VHILQNKNSP LTSIDLIDVV CFEKFVRNFS PEEQQHLMKL LPSIDTAKLP  300
DSLKSMFDSP QFVEAVSSFQ HLLLEGIFDL SFSEVKIEEC RTVKRLALVN MTKSKWVEHY  360
ELLKFTDDNQ DLLFDVPSYA SFPEAELLDY HPLKQKNPPK GSLIENRNIE KEETLSTYPS  420
LSFIG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16774KKLQKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-80GATA family protein