PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80964.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bZIP

Protein Properties

Length: 418aa MW: 45877.1 Da PI: 5.3629

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80964.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.6	3.6e-15	211	267	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++kr+rr+ +NRe+ArrsR+RK+a + eLe+ v++L e ++L k+l ++++ + RWR80964.1 211 DVKRARRMLSNRESARRSRRRKQAHLSELEQQVAQLRFEKSSLVKRLTDVSQKYNEA 267 78******************************************9999999888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MDRVFSVDEM ADPFWASTNA PAGNTMMNRS SSEWTFQRFL QEASVVEENH PPSSSSSSMK 60 TAGVDRVERA DRVFEIKDNE IPAKSDPPCD APVNSKEYQE LKRRLDLACA AVALARTSSV 120 KPQDSSPLVD SGPQASSSSQ SGSQPLGSTY GLPKMQDKAV GEPIGIPSLP VIPIGTGVQI 180 RPATSGSSRE QSDDDDIEGD TEITENMDPA DVKRARRMLS NRESARRSRR RKQAHLSELE 240 QQVAQLRFEK SSLVKRLTDV SQKYNEASVD NRILKADVET LRAKVKMAED TVKRVTGVNT 300 LFQTMSDISI SMPFSSSPSD ATDAAVPVQE NPSHFFQPTH DQRINTGPDI IPGPVEDLHN 360 PGGKMCRTTS MQRVASLEHL QKRIRGDANP CGPVMQWDGM WDPEPSHSVE SGTKQNQA

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MDRVFSVDEM ADPFWASTNA PAGNTMMNRS SSEWTFQRFL QEASVVEENH PPSSSSSSMK  60
TAGVDRVERA DRVFEIKDNE IPAKSDPPCD APVNSKEYQE LKRRLDLACA AVALARTSSV  120
KPQDSSPLVD SGPQASSSSQ SGSQPLGSTY GLPKMQDKAV GEPIGIPSLP VIPIGTGVQI  180
RPATSGSSRE QSDDDDIEGD TEITENMDPA DVKRARRMLS NRESARRSRR RKQAHLSELE  240
QQVAQLRFEK SSLVKRLTDV SQKYNEASVD NRILKADVET LRAKVKMAED TVKRVTGVNT  300
LFQTMSDISI SMPFSSSPSD ATDAAVPVQE NPSHFFQPTH DQRINTGPDI IPGPVEDLHN  360
PGGKMCRTTS MQRVASLEHL QKRIRGDANP CGPVMQWDGM WDPEPSHSVE SGTKQNQA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	233	RRSRRRKQ
2	228	233	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-59	bZIP family protein