PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80918.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 703aa MW: 79032 Da PI: 6.629

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.9	8e-09	464	501	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + RWR80918.1 464 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 501 554459******************************88 PP
2	BELL	115.3	3.1e-37	327	396	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+k kLl +leeVd+rY+qy+eq++ v+ssFeavag g+a +Y slAlka+SrhFrcL+d i++qi RWR80918.1 327 LELQKRKEKLLAMLEEVDRRYRQYCEQMRSVVSSFEAVAGAGAASVYSSLALKAMSRHFRCLRDGIVGQI 396 599*****************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MTLGPIFLLG RPLSYRDICP TKTGFSHLHS TTRRDFSSSM AHETREEKLR AQIGSGFYYS 60 DFPSSSSSSI PQLENQMQGF ESNPELFNLQ SGIEMLGFPW KNLQQRERSS LSGFLSKTDN 120 NHASSSKTVA DGSTTVFFQP DFRKSDFAVG FSEPTNENLM VAPDSSWQEN RLMVDDSSLR 180 CVFPCEGSER QSHGLSLSLC PNKVSSVGLQ SFELRESNHQ NDIRFVSPNS GDGFFGKTMD 240 LQQQQQQQNL LDGRSYPSMM GSSSQQFHLQ QLKNSKYLRP TQELLNEFCN LGSKQDKNNS 300 KNKFQKTNQC DEGVSSKNQS LFSLDFLELQ KRKEKLLAML EEVDRRYRQY CEQMRSVVSS 360 FEAVAGAGAA SVYSSLALKA MSRHFRCLRD GIVGQIQVTK KAMGEKDAVA PGTTRGETPR 420 LKLLDQTLRQ QRALQQMGMM ESHPWRPQRG LPERSVSVLR AWLFEHFLHP YPSDVDKHIL 480 ARQTGLSRSQ VSNWFINARV RLWKPMVEEM YLEETKEQDN KASDGGSMLQ DNSRPHPQHP 540 DQIPSPNPDH DNQLEQKPTP EELADDPESL SSIISSSDRR DQKDGKGDSH QQQSQFARAE 600 NFGVVDLDFS NYSHAGASTV TYGNSDCANP NFGSGVSLTL GLQQHSGGGV SLSFSPASQH 660 SLFFSRQHME ECPPMQYSML DGETQNLPYR NLMGAQLLHD LAG

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MTLGPIFLLG RPLSYRDICP TKTGFSHLHS TTRRDFSSSM AHETREEKLR AQIGSGFYYS  60
DFPSSSSSSI PQLENQMQGF ESNPELFNLQ SGIEMLGFPW KNLQQRERSS LSGFLSKTDN  120
NHASSSKTVA DGSTTVFFQP DFRKSDFAVG FSEPTNENLM VAPDSSWQEN RLMVDDSSLR  180
CVFPCEGSER QSHGLSLSLC PNKVSSVGLQ SFELRESNHQ NDIRFVSPNS GDGFFGKTMD  240
LQQQQQQQNL LDGRSYPSMM GSSSQQFHLQ QLKNSKYLRP TQELLNEFCN LGSKQDKNNS  300
KNKFQKTNQC DEGVSSKNQS LFSLDFLELQ KRKEKLLAML EEVDRRYRQY CEQMRSVVSS  360
FEAVAGAGAA SVYSSLALKA MSRHFRCLRD GIVGQIQVTK KAMGEKDAVA PGTTRGETPR  420
LKLLDQTLRQ QRALQQMGMM ESHPWRPQRG LPERSVSVLR AWLFEHFLHP YPSDVDKHIL  480
ARQTGLSRSQ VSNWFINARV RLWKPMVEEM YLEETKEQDN KASDGGSMLQ DNSRPHPQHP  540
DQIPSPNPDH DNQLEQKPTP EELADDPESL SSIISSSDRR DQKDGKGDSH QQQSQFARAE  600
NFGVVDLDFS NYSHAGASTV TYGNSDCANP NFGSGVSLTL GLQQHSGGGV SLSFSPASQH  660
SLFFSRQHME ECPPMQYSML DGETQNLPYR NLMGAQLLHD LAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-116	TALE family protein