PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80909.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 320aa    MW: 35485.7 Da    PI: 6.5744
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-134892147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       RWR80909.1 48 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 92
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MVAINHQASA PEASGFFLDP SGMPHAALSS SDDPNNKIRK HYTITKSRES WTEQEHDKFL  60
EALQLFDRDW KKIEAFVGSK TVIQIRSHAQ KYFLKVQKNG TSEHVPPPRP KRKAAHPYPQ  120
KASKNALLPS PSLVPFQSSQ FLLEPGYSLR TDSSSLLRNS TTSAAVSSWT HNSVLPLSVS  180
HVTKDDVGPA APTIANNYCC SISTESPPGT SLACERTDQE NHGPAPQVMP DFAQVYNFIG  240
YVFDPNTSGH LQKLTELDPI DVETILLLMR NLSMNLSSPE FEDHRMALSS YDVEPEESKP  300
DNVNRAIHAE EPQRAVPSRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.28e-81MYB_related family protein