PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR80668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | YABBY | ||||||||
Protein Properties | Length: 211aa MW: 23241.4 Da PI: 7.5308 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 234.2 | 3.1e-72 | 10 | 174 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 d+ seq+Cyv+Cn C t+lavsvP +sl+k+vtvrCGhCtsllsvn +++ ll+a ++l s++++ l ++ e++ + +++ ++++ s + RWR80668.1 10 DHLPPSEQLCYVHCNICGTVLAVSVPCSSLYKTVTVRCGHCTSLLSVN--MRTLLLPAANQL--SFNHSFLSASHNLLEETPTLPQSSLLNQSNPSETV 104 577899****************************************66..566778888875..34444444433333444444444444444445556 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +s+ + +e p++pp++rPPekrqrvPsaynrfik+eiqrika+nPdi+hreafsaaaknWahfP+ihfgl RWR80668.1 105 MSTLRMDEPPKAPPINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGL 174 78899999************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MSSSSPFSLD HLPPSEQLCY VHCNICGTVL AVSVPCSSLY KTVTVRCGHC TSLLSVNMRT 60 LLLPAANQLS FNHSFLSASH NLLEETPTLP QSSLLNQSNP SETVMSTLRM DEPPKAPPIN 120 RPPEKRQRVP SAYNRFIKDE IQRIKAGNPD ITHREAFSAA AKNWAHFPHI HFGLLPPEQG 180 VKKTSVCQQE GEDGLINDGF FSTANMGITP Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 4e-87 | YABBY family protein |